BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A04SP1|AL425053
(786 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1403 1488 0.0
>3x_Contig1403
Length = 7711
Score = 1488 bits (742), Expect = 0.0
Identities = 769/786 (97%), Gaps = 1/786 (0%)
Strand = Plus / Minus
Query: 1 tttcagcgaggwtctctcacgtcacgttatcagacagctggctaatgctgtgaaatatat 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382 tttcagcgaggatctctcacgtcacgttatcagacagctggctaatgctgtgaaatatat 4323
Query: 61 gchtcagttagggattgtacatcgtgatatcaaaccagagaatctattatttkahccaat 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 4322 gcatcagttagggattgtacatcgtgatatcaaaccagagaatctattatttgaaccaat 4263
Query: 121 cgatttcattccaaacccaaagccaaaactaaggagttctgatgatccgtccaccaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4262 cgatttcattccaaacccaaagccaaaactaaggagttctgatgatccgtccaccaagct 4203
Query: 181 agatgaaggtgtctttagacctggaatcggtggtggtggtatcggagtggtaaaacttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4202 agatgaaggtgtctttagacctggaatcggtggtggtggtatcggagtggtaaaacttgc 4143
Query: 241 cgactttgggttgtccaaacaaatctatcaaactaatacaaagaccccttgcgggactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4142 cgactttgggttgtccaaacaaatctatcaaactaatacaaagaccccttgcgggactgt 4083
Query: 301 aggatacactgcaccggaggkgntanaaakatgaacgttactcgatgcaagtwgacatgt 360
|||||||||||||||||||| | || ||| |||||||||||||||||||||| |||||||
Sbjct: 4082 aggatacactgcaccggaggtggta-aaagatgaacgttactcgatgcaagtagacatgt 4024
Query: 361 ggggcgtgggatgtgtgctatacacggtgctttgtggattccctccattctttgatgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4023 ggggcgtgggatgtgtgctatacacggtgctttgtggattccctccattctttgatgaaa 3964
Query: 421 aahttkatgttttaacggaaaahmtatctagaggtgaatacactttcctaagaccatggt 480
|| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3963 aaattgatgttttaacggaaaaaatatctagaggtgaatacactttcctaagaccatggt 3904
Query: 481 gggaccaaatcagtgacggagccaagaactgcgtnaggyaattgctagaagtcgacccgg 540
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 3903 gggaccaaatcagtgacggagccaagaactgcgtaaggaaattgctagaagtcgacccgg 3844
Query: 541 ctaaacgttacacatcagaacaattattachagatccgtggttgaattcgtacgattgtc 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3843 ctaaacgttacacatcagaacaattattacaagatccgtggttgaattcgtacgattgtc 3784
Query: 601 ttccatcggctgaccattccaatgcaccatcgactggtgaaaagaggagacattcgcaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3783 ttccatcggctgaccattccaatgcaccatcgactggtgaaaagaggagacattcgcaca 3724
Query: 661 agcattcaagaaaggcatacaagaaaaacgcatcattattatactcacctgctgccgttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3723 agcattcaagaaaggcatacaagaaaaacgcatcattattatactcacctgctgccgttg 3664
Query: 721 caatgcgtgacgcatttgacgtttcaaatgctgttcaacgtatagaagatgataaaagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3663 caatgcgtgacgcatttgacgtttcaaatgctgttcaacgtatagaagatgataaaagaa 3604
Query: 781 tgasgc 786
||| ||
Sbjct: 3603 tgacgc 3598
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4349
Number of Sequences: 1807
Number of extensions: 4349
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 786
length of database: 10,358,551
effective HSP length: 16
effective length of query: 770
effective length of database: 10,329,639
effective search space: 7953822030
effective search space used: 7953822030
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)